Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015827801.1_cds_XP_016503203.1_16770
CDS Infomation

[gene=LOC107821287] [db_xref=GeneID:107821287] [protein=putative UPF0481 protein At3g02645 isoform X2] [protein_id=XP_016503203.1] [location=107336..108835] [gbkey=CDS]
Sequence

ATGGAAGAAGGGAGGAAAGTGGATCATGTAATGGAGATAAAGGAAACAAATAGTGAAGAT
CAATCCAGGTTGCAAACCAGTAAATCCAGAAAACAAATCTTTGATGAAAGATTTAAGGAT
TTGAACAGTTGGTCAACCAAATCATGTACCATATTCAAAGTAAATGTGGCGTTACGTGAA
TCAAATCCAGATGCTTATACACCAAAGTTGATCCCCATTGGTCCTTACCATAACAAAAAT
CCTGAACTTGGTTCGATGGAAAAATACAAAATGTTGTACCTACAACAGTTTCTCCAGAGG
AAAGAGGGGCTTGATATGGAAAGTTGCATCAGAAAATTGGAGGAACTGAAGGATGAAGCA
CTAAAGTGTTATGAAGATATAGATTATAAGGACTTTGATACTGATGATAGCACAGGGAAA
TTCGTGGAAATGCTGTTGGTTGATGGCTGTTTCGTGGTTGAGTATATTCGAGAGGATTGT
TCGGCAGATGAGCCAAGAGAAGGCCGAATTATAAACACAGATTGGATGGTATCTCTTGTA
AATCGTGACCTGTTGCTGCTAGAGAACCAACTTCCTTTCTCTGTCCTCACTAAGCTTCAT
GATATGACTACGCATCAAGGTGAAATGTCATTCACAAAACAAGTGGAGAAGACTTTTTTA
TCTAACTTGTCGAATATGTGCCCTGCACCCTTGAGTGAGGTTACTACAGGTAATGCAGAC
AATATGGAACCCAAACATATACGACATGTATTACTCAAGGCCTGTCAACCTTCAAAGACG
ACAACTAGCACGACAGAATCAGAATCAGAATCAGAACATTCCAGGAAAAGCTTATGCTGG
AATCCTTTACAACTATTTAGGCCGAAAGAAACGCAAGGAGATACAAAGCACATAACGTTG
CATGGCAGCATGCCAAATGCAACAGAGCTTTGTGAAGCTGGAGTTACATTTTCAAAAGTT
CAAAATGTTTATAGGTCATCGGACACAAATAACACCCTTGGAAATAGGACAGTATCACTC
TTTGATATAAAATTTGAGAAAGGGTTAATGAAAATTCCTTCATTTGAAGTCGTTGATCTT
ACGGAGACTCTCCTGCGAAATCTCATAGCTTTTGAACAGCATTGGCCTGATGTATATCCT
ACATGTTTCAGTGATTATGTTACTTTCATGGATTATCTTATTGAATCAGAAAAAGATGTG
AGTTTGCTTCGCCTGAAAGGAATCATCAGAAACAGGATAGGAGAGGACAAAGAAGTGGCC
AGCATCTTCAACAAAATGGGGAAAGGGGTCGCCGTTTCATGTGAGGACTTCTACTACAAA
GAAGAATACAGAAAATTAATTCAACATTGTGAAAAACCATGGAACCGAATGAAGGCAAAT
TTGAGGCACAATTATTTTAGTAGTCCTTGGGCTGGAGCTTCAACTGTGGCAGCCGCCGTA
CTCCTCATACTCACAGCAATGCAGACAATACTAGCTTTCAGAGCTGATCGTAAGAAATAG

Peptide Sequence

PEP ID

XP_016503203.1
PEP Infomation

PREDICTED: putative UPF0481 protein At3g02645 isoform X2 [Nicotiana tabacum]
Sequence

MEEGRKVDHVMEIKETNSEDQSRLQTSKSRKQIFDERFKDLNSWSTKSCTIFKVNVALRE
SNPDAYTPKLIPIGPYHNKNPELGSMEKYKMLYLQQFLQRKEGLDMESCIRKLEELKDEA
LKCYEDIDYKDFDTDDSTGKFVEMLLVDGCFVVEYIREDCSADEPREGRIINTDWMVSLV
NRDLLLLENQLPFSVLTKLHDMTTHQGEMSFTKQVEKTFLSNLSNMCPAPLSEVTTGNAD
NMEPKHIRHVLLKACQPSKTTTSTTESESESEHSRKSLCWNPLQLFRPKETQGDTKHITL
HGSMPNATELCEAGVTFSKVQNVYRSSDTNNTLGNRTVSLFDIKFEKGLMKIPSFEVVDL
TETLLRNLIAFEQHWPDVYPTCFSDYVTFMDYLIESEKDVSLLRLKGIIRNRIGEDKEVA
SIFNKMGKGVAVSCEDFYYKEEYRKLIQHCEKPWNRMKANLRHNYFSSPWAGASTVAAAV
LLILTAMQTILAFRADRKK

Transcript Sequence

Gene sequence data has not been registered.